We've released 7.1.3 with a list of critical fixes patching up 7.1.2 (you can see all the fixes in the spreadsheet below)
Download 7.1.xls
FlowJo 7.2 beta build 16 - Jan 24 - get it here.
currently broken:
- kinetics overlays
- no support for Mac workspaces on PC yet
- flowjo cannot export FCS files bigger than 100MB
fixed since 7.1.3:
Authorization:
- FLS lookup should be much more rapid now
- different demo serial numbers will be issued starting 7.2 release
- serial number fields will show the "paste" menu when clicked
- fixed the problem with multiple hardware addresses, licensing via serial number should be easier.
Buttons and menus:
- "quit" button would ignore changes in FJ License Info dialog. Fixed.
Compensation:
- added compensation scripting. Explained here.
Diva:
- diva data from 3.1, 4.0, or 4.0.1 will be compensated properly
- we're no longer transforming linearly scaled diva parameters.
- DiVa prefs are now embedded into workspace files, and will over-ride local prefs if different.
- fixed problem with opening large diva files (tested up to 2.5M events)
Graph Window:
- gate freq. positioning and color inconsistent - fixed.
- dragging gates around would sometimes put some vertices off-screen. fixed.
- implemented polygon gate editing - alt+click = delete ctrl+alt = duplicate
- added keyboard shortcut ctrl+shift+r - resets all graph window sizes to one size.
- fixed the bug which made some windows oblong and warped.
- stats area now has scrollbars
- added ability to control fill setting in the histogram thru right-click menu
- added ability to copy histogram data as scale or channel values.
- preferences window painted in the wrong layer. Could lead to GUI block. Fixed.
- gating tools have keyboard shortcuts: (q)uad, (s)elect, (e)lipse, (r)ectangle, (p)olygon. In histogram mode, Q- bisecotor and I- range gate.
- double click gating tools to make them "stick" (draw other gates)
- fixed ellipse gates
- no more PINK gates. default changed to BLACK.
Kinetics
- KI fixed all kinds of kinetics bugs (FCS3 and FCS2 files, scaling, plotting, stats vs. mac)
Layout Editor
- dotting and dashing quality for overlay plots, lines, arrows, etc..
- overlay UI enhancements in the legend of overlays in layouts
- last layout is not deletable
- erratic change of sample selection in the layout
- sometimes gates would become extra-highlighted for no reason.. fixed.
- layouts with iteration errors would sometimes display a blank box without explaining.. fixed.
- chart duplication resulted in dragging chart without annotation. fixed.
- fixed series of bugs with multi-graph overlays. Added kb shortcut ctrl+shift+M to add graph.
- re-opened workspaces with batched layout would show the same stats or keywords.. fixed.
- saving to PDF fixed from layouts. PDF's will now use layout's pagination.
- batch dialog now remembers settings for each output when you switch output options
- printing dotplots with frequency floaters would make floaters unreadable.. fixed
- creating an oval gate in LE would put FlowJo in a weird state. fixed.
- improved gate editing UI - reduced number of mouse clicks in gate editing to 1
- fixed unit distribution axis lables to be independent of sigFigs setting
- fixed overlay line attribute bug
- legend-set controls are more consistent
- legend widths are now dynamically updated to fit content
- X axis label will now properly move closer if "hide numbers" checked in Graph Def'n dialog.
- saving textbox commits contents to become default annotation for graphs.. fixed.
- added rightclick menu which makes certain menu items easier to access (ie. paste)
- moving a gate in LE would snap the gate back.. fixed.
- added "set control" to right-click legend menu
- rightclick on chart shows parameters with current parameter grayed out.
- layout would not allow overlaying the same gate over itself, fixed.
- enabled gating to work properly in "graph sets"
- new zoom tool - left to the old one - allows drawing a rect-selection of what to zoom in on
- fixed header/footer
- implemented autobatching of layouts
Plate Editor
- fixed file menu items
Preferences
- disabled changing $FIL by renaming sample
- added pref for linear FL channel scaling for DiVa parameters
- added ability to save prefs for legend styling: line thickness, columns, colors..
- if flowjo diva scaling options are in effect, they will now take priority over $PNdisplay kw
- FlowJo's got a new private preference, private_showStainInStatisticsDialog. Set it to ="1" or "0" to toggle display of prefs with/out stain names (ex. fitc-a vs. fitc-a CD3)
- deleting a gate from favorites would corrupt remaining gates into a single-string.. fixed
- added right-click "paste" operation to serial number fields ;)
- added 32 bit (DIVA etc.) prefs link under Edit menu
Table Editor
- TE added shortcut to graph window (double-click on a row)
- can now move columns (drag column header to re-arrange output)
- added "copy raw" and "html" flavors to the clipboard
- can now set "clipboard" as an output option for generating tables
- can now "hide" output columns (double-click on an item in editor to enable attribute)
Workspace
- boolean gate's children nodes would sometimes calculate wrong %, fixed.
- boolean gates would misbehave when parent gates renamed
- nested boolean gates and their NOT gates would misbehave.. fixed
- group owned gates are no longer rename-able (have to detach it from group, then rename it)
- added support for the coulter CXP FCS3 format ($DFC...) - this needs verification
- closing workspace while adding samples would cause an error. Fixed.
- entering a "/" character into file name during save operation would nullify the save, fixed.
- deleting a compmatrix now properly un-compensates files in WS view.
- changing group name resets gate styling.. fixed
- can add multiple keywords in one shot
- added support for relative URI's if workspace is in parent folder relative to data.
- when editing keywords, users can now go across (tab) or down (enter)
- FCS and CSV data export as well as FCS concatenation have been fixed.
- ability to copy spreadsheets into flowjo to label keyword values has been added.
- ability to export csv files with gate inclusion/exclusion per event info added.
- can now drag files from one workspace window to another. gates, too.
- calibrated parameters did not work before. They work now.
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